Pseudomonas syringae pv. tomato DC3000, PSPTO_1005 (gmd)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_1005
NCBI Old Locus TagPSPTO1005
Name
gmd
Synonym: PSPTO1005
Replicon chromosome
Genomic location 1098690 - 1099736 (+ strand)

Cross-References

RefSeq NP_790843.1
GI 28868224
Entrez 1182639
INSDC AAO54538.1
NCBI Locus Tag PSPTO_1005
NCBI Old Locus Tag PSPTO1005
UniParc UPI000000864E
UniProtKB Acc Q888L3
UniProtKB ID Q888L3_PSESM
UniRef100 UniRef100_Q888L3
UniRef50 UniRef50_Q9JRN5
UniRef90 UniRef90_Q888L3

Product

Feature Type CDS
Coding Frame 1
Product Name
GDP-mannose 4,6-dehydratase
Synonyms
Evidence for Translation
Charge (pH 7) -2.58
Kyte-Doolittle Hydrophobicity Value -0.199
Molecular Weight (kDa) 39.1
Isoelectric Point (pI) 6.27

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 590 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004999 (389 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_1005
Search term: gmd

Human Homologs

Ensembl 97, assembly GRCh38.p12
GDP-mannose 4,6-dehydratase [Source:HGNC Symbol;Acc:HGNC:4369]
E-value: 1.8e-97
Percent Identity: 49.4

References

No references are associated with this feature.