Pseudomonas syringae pv. tomato DC3000, PSPTO_1007

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_1007
NCBI Old Locus TagPSPTO1007
Name
Synonym: PSPTO1007
Replicon chromosome
Genomic location 1099814 - 1100773 (- strand)

Cross-References

RefSeq NP_790845.1
GI 28868226
Entrez 1182641
INSDC AAO54540.1
NCBI Locus Tag PSPTO_1007
NCBI Old Locus Tag PSPTO1007
UniParc UPI0000008650
UniProtKB Acc Q888L1
UniProtKB ID Q888L1_PSESM
UniRef100 UniRef100_Q888L1
UniRef50 UniRef50_F2K416
UniRef90 UniRef90_Q888L1

Product

Feature Type CDS
Coding Frame 1
Product Name
GDP-6-deoxy-D-lyxo-4-hexulose reductase
Synonyms
Evidence for Translation
Charge (pH 7) -1.08
Kyte-Doolittle Hydrophobicity Value -0.028
Molecular Weight (kDa) 34.6
Isoelectric Point (pI) 6.78

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 645 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG017437 (20 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_1007

Human Homologs

References

No references are associated with this feature.