Pseudomonas syringae pv. tomato DC3000, PSPTO_1075

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_1075
NCBI Old Locus TagPSPTO1075
Name
Synonym: PSPTO1075
Replicon chromosome
Genomic location 1179310 - 1180674 (- strand)

Cross-References

RefSeq NP_790909.1
GI 28868290
Entrez 1182710
INSDC AAO54604.1
NCBI Locus Tag PSPTO_1075
NCBI Old Locus Tag PSPTO1075
UniParc UPI000000868C
UniProtKB Acc Q888F1
UniProtKB ID Q888F1_PSESM
UniRef100 UniRef100_Q888F1
UniRef50 UniRef50_D7HW77
UniRef90 UniRef90_D7HW77

Product

Feature Type CDS
Coding Frame 1
Product Name
O-antigen ABC transporter, ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -14.44
Kyte-Doolittle Hydrophobicity Value -0.186
Molecular Weight (kDa) 50.0
Isoelectric Point (pI) 4.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001312 (616 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_1075

Human Homologs

Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35]
E-value: 3.1e-17
Percent Identity: 26.9

References

No references are associated with this feature.