Pseudomonas syringae pv. tomato DC3000, PSPTO_1305

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1305
NCBI Old Locus Tag	PSPTO1305
Name	Synonym: PSPTO1305
Replicon	chromosome
Genomic location	1433678 - 1435186 (- strand)

Cross-References

RefSeq	NP_791134.1
GI	28868515
Entrez	1182941
INSDC	AAO54829.1
NCBI Locus Tag	PSPTO_1305
NCBI Old Locus Tag	PSPTO1305
UniParc	UPI0000008762
UniProtKB Acc	Q887I7
UniProtKB ID	Q887I7_PSESM
UniRef100	UniRef100_Q887I7
UniRef50	UniRef50_K9NRB3
UniRef90	UniRef90_Q887I7

Product

Feature Type	CDS
Coding Frame	1
Product Name	diguanylate cyclase
Synonyms
Evidence for Translation
Charge (pH 7)	-3.94
Kyte-Doolittle Hydrophobicity Value	-0.173
Molecular Weight (kDa)	55.9
Isoelectric Point (pI)	6.46

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 454 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG015202 (184 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1305 Search term: diguanylate cyclase

Human Homologs

References