Pseudomonas syringae pv. tomato DC3000, PSPTO_1661 (nrdB)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1661
NCBI Old Locus Tag	PSPTO1661
Name	nrdB Synonym: PSPTO1661
Replicon	chromosome
Genomic location	1830031 - 1831278 (- strand)

Cross-References

RefSeq	NP_791486.1
GI	28868867
Entrez	1183298
INSDC	AAO55181.1
NCBI Locus Tag	PSPTO_1661
NCBI Old Locus Tag	PSPTO1661
UniParc	UPI00000088BB
UniProtKB Acc	Q886C0
UniProtKB ID	Q886C0_PSESM
UniRef100	UniRef100_Q886C0
UniRef50	UniRef50_Q9I4I2
UniRef90	UniRef90_Q886C0

Product

Feature Type	CDS
Coding Frame	1
Product Name	ribonucleotide-diphosphate reductase subunit beta
Synonyms
Evidence for Translation
Charge (pH 7)	-21.47
Kyte-Doolittle Hydrophobicity Value	-0.300
Molecular Weight (kDa)	47.2
Isoelectric Point (pI)	4.51

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 401 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001114 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1661 Search term: nrdB Search term: ribonucleotide-diphosphate reductase subunit beta

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000428115 ribonucleotide reductase regulatory TP53 inducible subunit M2B [Source:HGNC Symbol;Acc:HGNC:17296] E-value: 6.0e-35 Percent Identity: 29.0
Ensembl 110, assembly GRCh38.p14	ENSP00000251810 ribonucleotide reductase regulatory TP53 inducible subunit M2B [Source:HGNC Symbol;Acc:HGNC:17296] E-value: 6.0e-35 Percent Identity: 29.0

References