Pseudomonas syringae pv. tomato DC3000, PSPTO_1693

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_1693
NCBI Old Locus TagPSPTO1693
Name
Synonym: PSPTO1693
Replicon chromosome
Genomic location 1862367 - 1863722 (+ strand)

Cross-References

RefSeq NP_791518.1
GI 28868899
Entrez 1183330
INSDC AAO55213.1
NCBI Locus Tag PSPTO_1693
NCBI Old Locus Tag PSPTO1693
UniParc UPI00000088DB
UniProtKB Acc Q885Y8
UniProtKB ID RLMD_PSESM
UniRef100 UniRef100_Q885Y8
UniRef50 UniRef50_Q4K898
UniRef90 UniRef90_Q48FH7

Product

Feature Type CDS
Coding Frame 1
Product Name
23S rRNA m(5)U1939 methyltransferase
Synonyms
Evidence for Translation
Charge (pH 7) 3.45
Kyte-Doolittle Hydrophobicity Value -0.059
Molecular Weight (kDa) 49.3
Isoelectric Point (pI) 7.85

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 551 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000899 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_1693

Human Homologs

References

No references are associated with this feature.