Pseudomonas syringae pv. tomato DC3000, PSPTO_1703

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1703
NCBI Old Locus Tag	PSPTO1703
Name	Synonym: PSPTO1703
Replicon	chromosome
Genomic location	1873622 - 1874326 (+ strand)

Cross-References

RefSeq	NP_791528.1
GI	28868909
Entrez	1183340
INSDC	AAO55223.1
NCBI Locus Tag	PSPTO_1703
NCBI Old Locus Tag	PSPTO1703
UniParc	UPI00000088E5
UniProtKB Acc	Q885X8
UniProtKB ID	Q885X8_PSESM
UniRef100	UniRef100_A0A038G9F4
UniRef50	UniRef50_A0A024EHC9
UniRef90	UniRef90_A0A024EHC9

Product

Feature Type	CDS
Coding Frame	1
Product Name	DNA replication initiation factor
Synonyms
Evidence for Translation
Charge (pH 7)	-2.89
Kyte-Doolittle Hydrophobicity Value	-0.139
Molecular Weight (kDa)	26.6
Isoelectric Point (pI)	6.05

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 549 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000913 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1703 Search term: DNA replication initiation factor

Human Homologs

References