Pseudomonas syringae pv. tomato DC3000, PSPTO_1724

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1724
NCBI Old Locus Tag	PSPTO1724
Name	Synonym: PSPTO1724
Replicon	chromosome
Genomic location	1893124 - 1894602 (+ strand)

Cross-References

RefSeq	NP_791549.1
GI	28868930
Entrez	1183361
INSDC	AAO55244.1
NCBI Locus Tag	PSPTO_1724
NCBI Old Locus Tag	PSPTO1724
UniParc	UPI00000088FA
UniProtKB Acc	Q885V7
UniProtKB ID	Q885V7_PSESM
UniRef100	UniRef100_Q885V7
UniRef50	UniRef50_Q9I4U3
UniRef90	UniRef90_Q885V7

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-10.30
Kyte-Doolittle Hydrophobicity Value	-0.507
Molecular Weight (kDa)	55.4
Isoelectric Point (pI)	5.15

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown (This protein may have multiple localization sites) Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 369 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000993 (533 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1724

Human Homologs

References