Pseudomonas syringae pv. tomato DC3000, PSPTO_2104

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2104
NCBI Old Locus Tag	PSPTO2104
Name	Synonym: PSPTO2104
Replicon	chromosome
Genomic location	2278340 - 2279638 (- strand)

Cross-References

RefSeq	NP_791927.1
GI	28869308
Entrez	1183751
INSDC	AAO55622.1
NCBI Locus Tag	PSPTO_2104
NCBI Old Locus Tag	PSPTO2104
UniParc	UPI0000008A71
UniProtKB Acc	Q884I8
UniProtKB ID	Q884I8_PSESM
UniRef100	UniRef100_Q884I8
UniRef50	UniRef50_B3R4U8
UniRef90	UniRef90_Q884I8

Product

Feature Type	CDS
Coding Frame	1
Product Name	major facilitator family transporter
Synonyms
Evidence for Translation
Charge (pH 7)	7.07
Kyte-Doolittle Hydrophobicity Value	0.687
Molecular Weight (kDa)	46.1
Isoelectric Point (pI)	9.26

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 307 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003937 (894 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2104 Search term: major facilitator family transporter

Human Homologs

References