Pseudomonas syringae pv. tomato DC3000, PSPTO_2261

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_2261
NCBI Old Locus TagPSPTO2261
Name
Synonym: PSPTO2261
Replicon chromosome
Genomic location 2505420 - 2506136 (+ strand)

Cross-References

RefSeq NP_792080.1
GI 28869461
Entrez 1183912
INSDC AAO55775.1
NCBI Locus Tag PSPTO_2261
NCBI Old Locus Tag PSPTO2261
UniParc UPI0000008B06
UniProtKB Acc Q883T9
UniProtKB ID Q883T9_PSESM
UniRef100 UniRef100_Q883T9
UniRef50 UniRef50_Q7NTB3
UniRef90 UniRef90_Q883T9

Product

Feature Type CDS
Coding Frame 1
Product Name
racemase
Synonyms
Evidence for Translation
Charge (pH 7) -6.95
Kyte-Doolittle Hydrophobicity Value 0.377
Molecular Weight (kDa) 25.4
Isoelectric Point (pI) 4.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 109 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG017799 (10 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_2261
Search term: racemase

Human Homologs

References

No references are associated with this feature.