Pseudomonas syringae pv. tomato DC3000, PSPTO_2267

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_2267
NCBI Old Locus TagPSPTO2267
Name
Synonym: PSPTO2267
Replicon chromosome
Genomic location 2511730 - 2512413 (- strand)

Cross-References

RefSeq NP_792086.1
GI 28869467
Entrez 1183918
INSDC AAO55781.1
NCBI Locus Tag PSPTO_2267
NCBI Old Locus Tag PSPTO2267
UniParc UPI0000008B0C
UniProtKB Acc Q883T3
UniProtKB ID Q883T3_PSESM
UniRef100 UniRef100_Q883T3
UniRef50 UniRef50_D7HYL9
UniRef90 UniRef90_D7HYL9

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -4.34
Kyte-Doolittle Hydrophobicity Value -0.222
Molecular Weight (kDa) 24.8
Isoelectric Point (pI) 5.91

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002712 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_2267

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value: 1.8e-17
Percent Identity: 31.9
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value: 1.8e-17
Percent Identity: 31.9
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value: 1.8e-17
Percent Identity: 31.9

References

No references are associated with this feature.