Pseudomonas syringae pv. tomato DC3000, PSPTO_2284

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2284
NCBI Old Locus Tag	PSPTO2284
Name	Synonym: PSPTO2284
Replicon	chromosome
Genomic location	2525232 - 2526773 (- strand)

Cross-References

RefSeq	NP_792103.1
GI	28869484
Entrez	1183935
INSDC	AAO55798.1
NCBI Locus Tag	PSPTO_2284
NCBI Old Locus Tag	PSPTO2284
UniParc	UPI0000008B1D
UniProtKB Acc	Q883R6
UniProtKB ID	Q883R6_PSESM
UniRef100	UniRef100_Q883R6
UniRef50	UniRef50_S3NIC3
UniRef90	UniRef90_S3NIC3

Product

Feature Type	CDS
Coding Frame	1
Product Name	membrane protein
Synonyms
Evidence for Translation
Charge (pH 7)	3.42
Kyte-Doolittle Hydrophobicity Value	0.237
Molecular Weight (kDa)	57.3
Isoelectric Point (pI)	8.61

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 43 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003628 (531 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2284 Search term: membrane protein

Human Homologs

References