Pseudomonas syringae pv. tomato DC3000, PSPTO_2342 (pcaC-1)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2342
NCBI Old Locus Tag	PSPTO2342
Name	pcaC-1 Synonym: PSPTO2342
Replicon	chromosome
Genomic location	2595830 - 2596228 (+ strand)

Cross-References

RefSeq	NP_792159.1
GI	28869540
Entrez	1183993
INSDC	AAO55854.1
NCBI Locus Tag	PSPTO_2342
NCBI Old Locus Tag	PSPTO2342
UniParc	UPI0000008B51
UniProtKB Acc	Q883L4
UniProtKB ID	Q883L4_PSESM
UniRef100	UniRef100_A0A038GDB1
UniRef50	UniRef50_P20370
UniRef90	UniRef90_D7HYY0

Product

Feature Type	CDS
Coding Frame	1
Product Name	4-carboxymuconolactone decarboxylase
Synonyms
Evidence for Translation
Charge (pH 7)	-4.83
Kyte-Doolittle Hydrophobicity Value	-0.411
Molecular Weight (kDa)	15.0
Isoelectric Point (pI)	5.26

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 249 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000231 (995 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2342 Search term: pcaC-1 Search term: 4-carboxymuconolactone decarboxylase

Human Homologs

References