Pseudomonas syringae pv. tomato DC3000, PSPTO_2344

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_2344
NCBI Old Locus TagPSPTO2344
Name
Synonym: PSPTO2344
Replicon chromosome
Genomic location 2598221 - 2599087 (+ strand)

Cross-References

RefSeq NP_792161.1
GI 28869542
Entrez 1183995
INSDC AAO55856.1
NCBI Locus Tag PSPTO_2344
NCBI Old Locus Tag PSPTO2344
UniParc UPI0000008B53
UniProtKB Acc Q883L2
UniProtKB ID Q883L2_PSESM
UniRef100 UniRef100_Q883L2
UniRef50 UniRef50_Q883L2
UniRef90 UniRef90_Q883L2

Product

Feature Type CDS
Coding Frame 1
Product Name
membrane protein
Synonyms
Evidence for Translation
Charge (pH 7) 10.51
Kyte-Doolittle Hydrophobicity Value 0.925
Molecular Weight (kDa) 31.1
Isoelectric Point (pI) 10.05

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 208 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000238 (848 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_2344
Search term: membrane protein

Human Homologs

References

No references are associated with this feature.