Pseudomonas syringae pv. tomato DC3000, PSPTO_2397

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_2397
NCBI Old Locus TagPSPTO2397
Name
Synonym: PSPTO2397
Replicon chromosome
Genomic location 2646227 - 2646991 (- strand)

Cross-References

RefSeq NP_792212.1
GI 28869593
Entrez 1184049
INSDC AAO55907.1
NCBI Locus Tag PSPTO_2397
NCBI Old Locus Tag PSPTO2397
UniParc UPI0000008B83
UniProtKB Acc Q883G6
UniProtKB ID Q883G6_PSESM
UniRef100 UniRef100_Q883G6
UniRef50 UniRef50_I3X3J1
UniRef90 UniRef90_E2XTQ3

Product

Feature Type CDS
Coding Frame 1
Product Name
short chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -3.71
Kyte-Doolittle Hydrophobicity Value 0.324
Molecular Weight (kDa) 26.4
Isoelectric Point (pI) 4.99

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 652 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG017836 (21 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_2397

Human Homologs

Ensembl 97, assembly GRCh38.p12
peroxisomal trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:18281]
E-value: 6.2e-23
Percent Identity: 32.4

References

No references are associated with this feature.