Pseudomonas syringae pv. tomato DC3000, PSPTO_2687

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2687
NCBI Old Locus Tag	PSPTO2687
Name	Synonym: PSPTO2687
Replicon	chromosome
Genomic location	2981249 - 2981812 (+ strand)

Cross-References

RefSeq	NP_792494.1
GI	28869875
Entrez	1184339
INSDC	AAO56189.1
NCBI Locus Tag	PSPTO_2687
NCBI Old Locus Tag	PSPTO2687
UniParc	UPI0000008C96
UniProtKB Acc	Q882E1
UniProtKB ID	Q882E1_PSESM
UniRef100	UniRef100_Q882E1
UniRef50	UniRef50_Q882E1
UniRef90	UniRef90_Q882E1

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-0.56
Kyte-Doolittle Hydrophobicity Value	0.080
Molecular Weight (kDa)	20.9
Isoelectric Point (pI)	6.53

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 86 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000054 (466 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2687

Human Homologs

References