Pseudomonas syringae pv. tomato DC3000, PSPTO_2721

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2721
NCBI Old Locus Tag	PSPTO2721
Name	Synonym: PSPTO2721
Replicon	chromosome
Genomic location	3020286 - 3021065 (- strand)

Cross-References

RefSeq	NP_792527.1
GI	28869908
Entrez	1184375
INSDC	AAO56222.1
NCBI Locus Tag	PSPTO_2721
NCBI Old Locus Tag	PSPTO2721
UniParc	UPI0000008CB7
UniProtKB Acc	Q882A8
UniProtKB ID	Q882A8_PSESM
UniRef100	UniRef100_Q882A8
UniRef50	UniRef50_Q882A8
UniRef90	UniRef90_Q882A8

Product

Feature Type	CDS
Coding Frame	1
Product Name	membrane protein
Synonyms
Evidence for Translation
Charge (pH 7)	7.15
Kyte-Doolittle Hydrophobicity Value	0.764
Molecular Weight (kDa)	27.2
Isoelectric Point (pI)	9.96

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 282 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003574 (533 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2721 Search term: membrane protein

Human Homologs

References