Pseudomonas syringae pv. tomato DC3000, PSPTO_2852

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2852
NCBI Old Locus Tag	PSPTO2852
Name	Synonym: PSPTO2852
Replicon	chromosome
Genomic location	3203321 - 3203902 (+ strand)

Cross-References

RefSeq	NP_792654.1
GI	28870035
Entrez	1184506
INSDC	AAO56349.1
NCBI Locus Tag	PSPTO_2852
NCBI Old Locus Tag	PSPTO2852
UniParc	UPI0000008D30
UniProtKB Acc	Q881N6
UniProtKB ID	Q881N6_PSESM
UniRef100	UniRef100_Q881N6
UniRef50	UniRef50_Q88HM1
UniRef90	UniRef90_Q881N6

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	2.83
Kyte-Doolittle Hydrophobicity Value	-0.232
Molecular Weight (kDa)	22.0
Isoelectric Point (pI)	8.32

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 4 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001882 (351 members)
Putative Inparalogs	1 predicted inparalogs hypothetical protein (PSPTO_2844) 71.8% identity

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2852

Human Homologs

References