Pseudomonas syringae pv. tomato DC3000, PSPTO_2875

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_2875
NCBI Old Locus TagPSPTO2875
Name
Synonym: PSPTO2875
Replicon chromosome
Genomic location 3238149 - 3238841 (+ strand)

Cross-References

RefSeq NP_792676.1
GI 28870057
Entrez 1184529
INSDC AAO56371.1
NCBI Locus Tag PSPTO_2875
NCBI Old Locus Tag PSPTO2875
UniParc UPI0000008D46
UniProtKB Acc Q881L4
UniProtKB ID Q881L4_PSESM
UniRef100 UniRef100_Q881L4
UniRef50 UniRef50_A0A085HRI6
UniRef90 UniRef90_Q881L4

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -3.62
Kyte-Doolittle Hydrophobicity Value 0.182
Molecular Weight (kDa) 24.7
Isoelectric Point (pI) 5.93

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000072 (425 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_2875

Human Homologs

Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38]
E-value: 1.8e-13
Percent Identity: 32.1
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38]
E-value: 1.8e-13
Percent Identity: 32.1
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38]
E-value: 1.8e-13
Percent Identity: 32.1

References

No references are associated with this feature.