Pseudomonas syringae pv. tomato DC3000, PSPTO_2876

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2876
NCBI Old Locus Tag	PSPTO2876
Name	Synonym: PSPTO2876
Replicon	chromosome
Genomic location	3238825 - 3240048 (+ strand)

Cross-References

RefSeq	NP_792677.1
GI	28870058
Entrez	1184530
INSDC	AAO56372.1
NCBI Locus Tag	PSPTO_2876
NCBI Old Locus Tag	PSPTO2876
UniParc	UPI0000008D47
UniProtKB Acc	Q881L3
UniProtKB ID	Q881L3_PSESM
UniRef100	UniRef100_Q881L3
UniRef50	UniRef50_Q881L3
UniRef90	UniRef90_Q881L3

Product

Feature Type	CDS
Coding Frame	1
Product Name	ABC transporter permease
Synonyms
Evidence for Translation
Charge (pH 7)	8.83
Kyte-Doolittle Hydrophobicity Value	0.370
Molecular Weight (kDa)	43.6
Isoelectric Point (pI)	9.92

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 33 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG018081 (7 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2876 Search term: ABC transporter permease

Human Homologs

References