Pseudomonas syringae pv. tomato DC3000, PSPTO_2943 (vdh)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_2943
NCBI Old Locus TagPSPTO2943
Name
vdh
Synonym: PSPTO2943
Replicon chromosome
Genomic location 3306019 - 3307467 (- strand)

Cross-References

RefSeq NP_792741.1
GI 28870122
Entrez 1184597
INSDC AAO56436.1
NCBI Locus Tag PSPTO_2943
NCBI Old Locus Tag PSPTO2943
UniParc UPI0000008D86
UniProtKB Acc Q881F0
UniProtKB ID Q881F0_PSESM
UniRef100 UniRef100_Q881F0
UniRef50 UniRef50_O05619
UniRef90 UniRef90_O69763

Product

Feature Type CDS
Coding Frame 1
Product Name
vanillin dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -7.24
Kyte-Doolittle Hydrophobicity Value 0.214
Molecular Weight (kDa) 50.2
Isoelectric Point (pI) 5.46

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 597 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG018120 (76 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_2943
Search term: vdh

Human Homologs

Ensembl 97, assembly GRCh38.p12
aldehyde dehydrogenase 5 family member A1 [Source:HGNC Symbol;Acc:HGNC:408]
E-value: 1.7e-61
Percent Identity: 32.7

References

No references are associated with this feature.