Pseudomonas syringae pv. tomato DC3000, PSPTO_3037

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_3037
NCBI Old Locus TagPSPTO3037
Name
Synonym: PSPTO3037
Replicon chromosome
Genomic location 3415757 - 3417163 (- strand)

Cross-References

RefSeq NP_792832.1
GI 28870213
Entrez 1184694
INSDC AAO56527.1
NCBI Locus Tag PSPTO_3037
NCBI Old Locus Tag PSPTO3037
UniParc UPI0000008DDD
UniProtKB Acc Q880W3
UniProtKB ID Q880W3_PSESM
UniRef100 UniRef100_Q880W3
UniRef50 UniRef50_Q48JB0
UniRef90 UniRef90_Q880W3

Product

Feature Type CDS
Coding Frame 1
Product Name
transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 6.85
Kyte-Doolittle Hydrophobicity Value -0.128
Molecular Weight (kDa) 52.8
Isoelectric Point (pI) 8.22

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 368 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015940 (152 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_3037

Human Homologs

References

No references are associated with this feature.