Pseudomonas syringae pv. tomato DC3000, PSPTO_3038

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_3038
NCBI Old Locus TagPSPTO3038
Name
Synonym: PSPTO3038
Replicon chromosome
Genomic location 3417166 - 3418668 (- strand)

Cross-References

RefSeq NP_792833.1
GI 28870214
Entrez 1184695
INSDC AAO56528.1
NCBI Locus Tag PSPTO_3038
NCBI Old Locus Tag PSPTO3038
UniParc UPI0000008DDE
UniProtKB Acc Q880W2
UniProtKB ID Q880W2_PSESM
UniRef100 UniRef100_Q880W2
UniRef50 UniRef50_Q880W2
UniRef90 UniRef90_Q880W2

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.83
Kyte-Doolittle Hydrophobicity Value -0.141
Molecular Weight (kDa) 55.6
Isoelectric Point (pI) 6.84

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 3 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015939 (162 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_3038

Human Homologs

References

No references are associated with this feature.