Pseudomonas syringae pv. tomato DC3000, PSPTO_3041

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3041
NCBI Old Locus Tag	PSPTO3041
Name	Synonym: PSPTO3041
Replicon	chromosome
Genomic location	3421941 - 3422894 (- strand)

Cross-References

RefSeq	NP_792836.1
GI	28870217
Entrez	1184698
INSDC	AAO56531.1
NCBI Locus Tag	PSPTO_3041
NCBI Old Locus Tag	PSPTO3041
UniParc	UPI0000008DE1
UniProtKB Acc	Q880V9
UniProtKB ID	Q880V9_PSESM
UniRef100	UniRef100_Q880V9
UniRef50	UniRef50_Q880V9
UniRef90	UniRef90_Q880V9

Product

Feature Type	CDS
Coding Frame	1
Product Name	membrane protein
Synonyms
Evidence for Translation
Charge (pH 7)	7.40
Kyte-Doolittle Hydrophobicity Value	0.761
Molecular Weight (kDa)	35.0
Isoelectric Point (pI)	9.83

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG018169 (14 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3041 Search term: membrane protein

Human Homologs

References