Pseudomonas syringae pv. tomato DC3000, PSPTO_3043

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_3043
NCBI Old Locus TagPSPTO3043
Name
Synonym: PSPTO3043
Replicon chromosome
Genomic location 3423692 - 3424648 (- strand)

Cross-References

RefSeq NP_792837.1
GI 28870218
Entrez 1184700
INSDC AAO56532.1
NCBI Locus Tag PSPTO_3043
NCBI Old Locus Tag PSPTO3043
UniParc UPI0000008DE2
UniProtKB Acc Q880V8
UniProtKB ID Q880V8_PSESM
UniRef100 UniRef100_Q880V8
UniRef50 UniRef50_Q314Q6
UniRef90 UniRef90_Q880V8

Product

Feature Type CDS
Coding Frame 1
Product Name
5'-nucleotidase
Synonyms
Evidence for Translation
Charge (pH 7) -6.35
Kyte-Doolittle Hydrophobicity Value -0.223
Molecular Weight (kDa) 35.3
Isoelectric Point (pI) 5.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 80 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015753 (201 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_3043
Search term: 5'-nucleotidase

Human Homologs

Ensembl 110, assembly GRCh38.p14
5'-nucleotidase, cytosolic IA [Source:HGNC Symbol;Acc:HGNC:17819]
E-value: 2.0e-46
Percent Identity: 36.1

References

No references are associated with this feature.