Pseudomonas syringae pv. tomato DC3000, PSPTO_3055

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3055
NCBI Old Locus Tag	PSPTO3055
Name	Synonym: PSPTO3055
Replicon	chromosome
Genomic location	3436113 - 3436262 (- strand)

Cross-References

RefSeq	NP_792849.1
GI	28870230
Entrez	1184712
INSDC	AAO56544.1
NCBI Locus Tag	PSPTO_3055
NCBI Old Locus Tag	PSPTO3055
UniParc	UPI0000008DEE
UniProtKB Acc	Q880U6
UniProtKB ID	Q880U6_PSESM
UniRef100	UniRef100_Q880U6
UniRef50	UniRef50_Q880U6
UniRef90	UniRef90_Q880U6

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-5.08
Kyte-Doolittle Hydrophobicity Value	0.022
Molecular Weight (kDa)	5.2
Isoelectric Point (pI)	3.88

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Pathogenic Found only in pathogenic strains Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG018173 (1 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3055

Human Homologs

References