Pseudomonas syringae pv. tomato DC3000, PSPTO_3062

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3062
NCBI Old Locus Tag	PSPTO3062
Name	Synonym: PSPTO3062
Replicon	chromosome
Genomic location	3443659 - 3444909 (+ strand)

Cross-References

RefSeq	NP_792856.1
GI	28870237
Entrez	1184719
INSDC	AAO56551.1
NCBI Locus Tag	PSPTO_3062
NCBI Old Locus Tag	PSPTO3062
UniParc	UPI0000008DF5
UniProtKB Acc	Q880T9
UniProtKB ID	Q880T9_PSESM
UniRef100	UniRef100_Q880T9
UniRef50	UniRef50_Q92ZP9
UniRef90	UniRef90_Q880T9

Product

Feature Type	CDS
Coding Frame	1
Product Name	iron-sulfur cluster-binding protein, rieske family
Synonyms
Evidence for Translation
Charge (pH 7)	-6.20
Kyte-Doolittle Hydrophobicity Value	-0.326
Molecular Weight (kDa)	46.6
Isoelectric Point (pI)	6.19

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 189 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG018177 (23 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3062 Search term: iron-sulfur cluster-binding protein, rieske family

Human Homologs

References