Pseudomonas syringae pv. tomato DC3000, PSPTO_3068

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3068
NCBI Old Locus Tag	PSPTO3068
Name	Synonym: PSPTO3068
Replicon	chromosome
Genomic location	3450465 - 3451592 (- strand)

Cross-References

RefSeq	NP_792862.1
GI	28870243
Entrez	1184725
INSDC	AAO56557.1
NCBI Locus Tag	PSPTO_3068
NCBI Old Locus Tag	PSPTO3068
UniParc	UPI0000008DFB
UniProtKB Acc	Q880T3
UniProtKB ID	Q880T3_PSESM
UniRef100	UniRef100_Q880T3
UniRef50	UniRef50_I3TX75
UniRef90	UniRef90_Q880T3

Product

Feature Type	CDS
Coding Frame	1
Product Name	major facilitator family transporter
Synonyms
Evidence for Translation
Charge (pH 7)	10.91
Kyte-Doolittle Hydrophobicity Value	0.998
Molecular Weight (kDa)	39.3
Isoelectric Point (pI)	10.87

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 283 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003191 (426 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3068 Search term: major facilitator family transporter

Human Homologs

References