Pseudomonas syringae pv. tomato DC3000, PSPTO_3071

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3071
NCBI Old Locus Tag	PSPTO3071
Name	Synonym: PSPTO3071
Replicon	chromosome
Genomic location	3453003 - 3454862 (+ strand)

Cross-References

RefSeq	NP_792865.1
GI	28870246
Entrez	1184728
INSDC	AAO56560.1
NCBI Locus Tag	PSPTO_3071
NCBI Old Locus Tag	PSPTO3071
UniParc	UPI0000008DFE
UniProtKB Acc	Q880T0
UniProtKB ID	Q880T0_PSESM
UniRef100	UniRef100_Q880T0
UniRef50	UniRef50_E0NCY9
UniRef90	UniRef90_W6V8X9

Product

Feature Type	CDS
Coding Frame	1
Product Name	ABC transporter ATP-binding protein/permease
Synonyms
Evidence for Translation
Charge (pH 7)	-0.64
Kyte-Doolittle Hydrophobicity Value	0.148
Molecular Weight (kDa)	67.7
Isoelectric Point (pI)	6.90

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG015812 (108 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3071 Search term: ABC transporter ATP-binding protein/permease

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000295750 ATP binding cassette subfamily B member 6 (Langereis blood group) [Source:HGNC Symbol;Acc:HGNC:47] E-value: 6.0e-63 Percent Identity: 39.6
Ensembl 110, assembly GRCh38.p14	ENSP00000265316 ATP binding cassette subfamily B member 6 (Langereis blood group) [Source:HGNC Symbol;Acc:HGNC:47] E-value: 6.0e-63 Percent Identity: 39.6

References