Pseudomonas syringae pv. tomato DC3000, PSPTO_3077

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3077
NCBI Old Locus Tag	PSPTO3077
Name	Synonym: PSPTO3077
Replicon	chromosome
Genomic location	3459847 - 3460950 (+ strand)

Cross-References

RefSeq	NP_792871.1
GI	28870252
Entrez	1184734
INSDC	AAO56566.1
NCBI Locus Tag	PSPTO_3077
NCBI Old Locus Tag	PSPTO3077
UniParc	UPI0000008E04
UniProtKB Acc	Q880S4
UniProtKB ID	Q880S4_PSESM
UniRef100	UniRef100_Q880S4
UniRef50	UniRef50_O31246
UniRef90	UniRef90_Q880S4

Product

Feature Type	CDS
Coding Frame	1
Product Name	NADH:flavin oxidoreductase / NADH oxidase family protein
Synonyms
Evidence for Translation
Charge (pH 7)	-8.59
Kyte-Doolittle Hydrophobicity Value	-0.254
Molecular Weight (kDa)	39.7
Isoelectric Point (pI)	5.37

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 505 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG018183 (36 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3077 Search term: NADH:flavin oxidoreductase / NADH oxidase family protein

Human Homologs

References