Pseudomonas syringae pv. tomato DC3000, PSPTO_3080

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3080
NCBI Old Locus Tag	PSPTO3080
Name	Synonym: PSPTO3080
Replicon	chromosome
Genomic location	3462124 - 3463221 (- strand)

Cross-References

RefSeq	NP_792874.1
GI	28870255
Entrez	1184737
INSDC	AAO56569.1
NCBI Locus Tag	PSPTO_3080
NCBI Old Locus Tag	PSPTO3080
UniParc	UPI0000008E07
UniProtKB Acc	Q880S1
UniProtKB ID	Q880S1_PSESM
UniRef100	UniRef100_Q880S1
UniRef50	UniRef50_W6WXF5
UniRef90	UniRef90_Q880S1

Product

Feature Type	CDS
Coding Frame	1
Product Name	NADH:flavin oxidoreductase / NADH oxidase family
Synonyms
Evidence for Translation
Charge (pH 7)	-2.10
Kyte-Doolittle Hydrophobicity Value	-0.270
Molecular Weight (kDa)	39.5
Isoelectric Point (pI)	6.52

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 504 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG018186 (44 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3080 Search term: NADH:flavin oxidoreductase / NADH oxidase family

Human Homologs

References