Pseudomonas syringae pv. tomato DC3000, PSPTO_3081

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_3081
NCBI Old Locus TagPSPTO3081
Name
Synonym: PSPTO3081
Replicon chromosome
Genomic location 3463360 - 3464283 (+ strand)

Cross-References

RefSeq NP_792875.1
GI 28870256
Entrez 1184738
INSDC AAO56570.1
NCBI Locus Tag PSPTO_3081
NCBI Old Locus Tag PSPTO3081
UniParc UPI0000008E08
UniProtKB Acc Q880S0
UniProtKB ID Q880S0_PSESM
UniRef100 UniRef100_Q880S0
UniRef50 UniRef50_B7KQA4
UniRef90 UniRef90_Q880S0

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 0.63
Kyte-Doolittle Hydrophobicity Value 0.030
Molecular Weight (kDa) 33.1
Isoelectric Point (pI) 7.22

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 497 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG018187 (72 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_3081

Human Homologs

References

No references are associated with this feature.