Pseudomonas syringae pv. tomato DC3000, PSPTO_3083

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_3083
NCBI Old Locus TagPSPTO3083
Name
Synonym: PSPTO3083
Replicon chromosome
Genomic location 3465194 - 3465955 (- strand)

Cross-References

RefSeq NP_792877.1
GI 28870258
Entrez 1184740
INSDC AAO56572.1
NCBI Locus Tag PSPTO_3083
NCBI Old Locus Tag PSPTO3083
UniParc UPI0000008E0A
UniProtKB Acc Q880R8
UniProtKB ID Q880R8_PSESM
UniRef100 UniRef100_Q880R8
UniRef50 UniRef50_Q9HZS1
UniRef90 UniRef90_Q880R8

Product

Feature Type CDS
Coding Frame 1
Product Name
glutamine/glutamate ABC transporter, ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) 0.11
Kyte-Doolittle Hydrophobicity Value 0.029
Molecular Weight (kDa) 28.0
Isoelectric Point (pI) 7.05

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG018189 (104 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_3083

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 7.7e-25
Percent Identity: 38.5
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 7.7e-25
Percent Identity: 38.5
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 7.7e-25
Percent Identity: 38.5
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 7.7e-25
Percent Identity: 38.5

References

No references are associated with this feature.