Pseudomonas syringae pv. tomato DC3000, PSPTO_3084

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3084
NCBI Old Locus Tag	PSPTO3084
Name	Synonym: PSPTO3084
Replicon	chromosome
Genomic location	3465952 - 3466611 (- strand)

Cross-References

RefSeq	NP_792878.1
GI	28870259
Entrez	1184741
INSDC	AAO56573.1
NCBI Locus Tag	PSPTO_3084
NCBI Old Locus Tag	PSPTO3084
UniParc	UPI0000008E0B
UniProtKB Acc	Q880R7
UniProtKB ID	Q880R7_PSESM
UniRef100	UniRef100_Q880R7
UniRef50	UniRef50_E2XJS1
UniRef90	UniRef90_Q880R7

Product

Feature Type	CDS
Coding Frame	1
Product Name	glutamine/glutamate ABC transporter, permease protein
Synonyms
Evidence for Translation
Charge (pH 7)	9.13
Kyte-Doolittle Hydrophobicity Value	0.832
Molecular Weight (kDa)	24.1
Isoelectric Point (pI)	10.16

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 443 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG018190 (106 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3084 Search term: glutamine/glutamate ABC transporter, permease protein

Human Homologs

References