Pseudomonas syringae pv. tomato DC3000, PSPTO_3085

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3085
NCBI Old Locus Tag	PSPTO3085
Name	Synonym: PSPTO3085
Replicon	chromosome
Genomic location	3466592 - 3467257 (- strand)

Cross-References

RefSeq	NP_792879.1
GI	28870260
Entrez	1184742
INSDC	AAO56574.1
NCBI Locus Tag	PSPTO_3085
NCBI Old Locus Tag	PSPTO3085
UniParc	UPI0000008E0C
UniProtKB Acc	Q880R6
UniProtKB ID	Q880R6_PSESM
UniRef100	UniRef100_Q880R6
UniRef50	UniRef50_T2HFB1
UniRef90	UniRef90_Q880R6

Product

Feature Type	CDS
Coding Frame	1
Product Name	glutamine/glutamate ABC transporter, permease protein
Synonyms
Evidence for Translation
Charge (pH 7)	5.67
Kyte-Doolittle Hydrophobicity Value	1.013
Molecular Weight (kDa)	24.1
Isoelectric Point (pI)	9.73

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 444 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG018191 (111 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3085 Search term: glutamine/glutamate ABC transporter, permease protein

Human Homologs

References