Strain |
Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest |
Locus Tag |
PSPTO_3100
|
NCBI Old Locus Tag | PSPTO3100 |
Name |
saxF
Synonym: PSPTO3100 |
Replicon | chromosome |
Genomic location | 3484393 - 3487584 (+ strand) |
RefSeq | NP_792892.1 |
GI | 28870273 |
Entrez | 1184757 |
INSDC | AAO56587.1 |
NCBI Locus Tag | PSPTO_3100 |
NCBI Old Locus Tag | PSPTO3100 |
UniParc | UPI0000008E19 |
UniProtKB Acc | Q880Q4 |
UniProtKB ID | Q880Q4_PSESM |
UniRef100 | UniRef100_Q880Q4 |
UniRef50 | UniRef50_Q880Q4 |
UniRef90 | UniRef90_Q880Q4 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
aliphatic isothiocyanate resistance protein SaxF; AcrB/AcrD/AcrF family
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -10.67 |
Kyte-Doolittle Hydrophobicity Value | 0.319 |
Molecular Weight (kDa) | 115.1 |
Isoelectric Point (pI) | 5.41 |
Individual Mappings | |
Additional evidence for subcellular localization |
Identified using the Resistance Gene Identifier (RGI)
Model Name | Definition | Accession | Model Type (?) | SNP | Cutoff | Bit Score | Percent Identity | CARD Version |
adeF | AdeF is the membrane fusion protein of the multidrug efflux complex AdeFGH. [PMID:20696879] | ARO:3000777 | protein homolog model | Strict | 1336.2 | 66.1 | 3.2.5 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 489 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000417 (2093 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PSPTO_3100
Search term: saxF
|