Pseudomonas syringae pv. tomato DC3000, PSPTO_3107 (ahpF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_3107
NCBI Old Locus TagPSPTO3107
Name
ahpF
Synonym: PSPTO3107
Replicon chromosome
Genomic location 3492875 - 3494437 (- strand)

Cross-References

RefSeq NP_792899.1
GI 28870280
Entrez 1184764
INSDC AAO56594.1
NCBI Locus Tag PSPTO_3107
NCBI Old Locus Tag PSPTO3107
UniParc UPI0000008E20
UniProtKB Acc Q880P7
UniProtKB ID Q880P7_PSESM
UniRef100 UniRef100_Q880P7
UniRef50 UniRef50_P35340
UniRef90 UniRef90_Q48JF3

Product

Feature Type CDS
Coding Frame 1
Product Name
alkyl hydroperoxide reductase subunit F
Synonyms
Evidence for Translation
Charge (pH 7) -8.45
Kyte-Doolittle Hydrophobicity Value 0.004
Molecular Weight (kDa) 55.5
Isoelectric Point (pI) 5.66

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 660 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000138 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_3107
Search term: ahpF

Human Homologs

References

No references are associated with this feature.