Pseudomonas syringae pv. tomato DC3000, PSPTO_3231
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest |
| Locus Tag |
PSPTO_3231
|
| NCBI Old Locus Tag | PSPTO3231 |
| Name |
Synonym: PSPTO3231 |
| Replicon | chromosome |
| Genomic location | 3650472 - 3651347 (+ strand) |
Cross-References
| RefSeq | NP_793016.1 |
| GI | 28870397 |
| Entrez | 1184888 |
| INSDC | AAO56711.1 |
| NCBI Locus Tag | PSPTO_3231 |
| NCBI Old Locus Tag | PSPTO3231 |
| UniParc | UPI0000008E8C |
| UniProtKB Acc | Q880D9 |
| UniProtKB ID | Q880D9_PSESM |
| UniRef100 | UniRef100_Q880D9 |
| UniRef50 | UniRef50_Q3KE23 |
| UniRef90 | UniRef90_Q880D9 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
LysR family transcriptional regulator
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 2.38 |
| Kyte-Doolittle Hydrophobicity Value | 0.005 |
| Molecular Weight (kDa) | 32.0 |
| Isoelectric Point (pI) | 8.26 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 518 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000789 (471 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSPTO_3231
Search term: LysR family transcriptional regulator
|
Human Homologs
References
No references are associated with this feature.