Pseudomonas syringae pv. tomato DC3000, PSPTO_3237

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3237
NCBI Old Locus Tag	PSPTO3237
Name	Synonym: PSPTO3237
Replicon	chromosome
Genomic location	3657206 - 3659521 (+ strand)

Cross-References

RefSeq	NP_793021.1
GI	28870402
Entrez	1184895
INSDC	AAO56716.1
NCBI Locus Tag	PSPTO_3237
NCBI Old Locus Tag	PSPTO3237
UniParc	UPI0000008E91
UniProtKB Acc	Q880D4
UniProtKB ID	Q880D4_PSESM
UniRef100	UniRef100_Q880D4
UniRef50	UniRef50_Q4KCN2
UniRef90	UniRef90_Q48HG7

Product

Feature Type	CDS
Coding Frame	1
Product Name	methyl-accepting chemotaxis protein
Synonyms
Evidence for Translation
Charge (pH 7)	-4.47
Kyte-Doolittle Hydrophobicity Value	-0.101
Molecular Weight (kDa)	82.5
Isoelectric Point (pI)	6.32

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 398 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG018256 (85 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3237 Search term: methyl-accepting chemotaxis protein

Human Homologs

References