Pseudomonas syringae pv. tomato DC3000, PSPTO_3582 (katB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_3582
NCBI Old Locus TagPSPTO3582
Name
katB
Synonym: PSPTO3582
Replicon chromosome
Genomic location 4040557 - 4042089 (+ strand)

Cross-References

RefSeq NP_793361.1
GI 28870742
Entrez 1185247
INSDC AAO57056.1
NCBI Locus Tag PSPTO_3582
NCBI Old Locus Tag PSPTO3582
UniParc UPI0000008FE0
UniProtKB Acc Q87Z49
UniProtKB ID Q87Z49_PSESM
UniRef100 UniRef100_Q87Z49
UniRef50 UniRef50_Q59635
UniRef90 UniRef90_P46206

Product

Feature Type CDS
Coding Frame 1
Product Name
catalase
Synonyms
Evidence for Translation
Charge (pH 7) -0.10
Kyte-Doolittle Hydrophobicity Value -0.534
Molecular Weight (kDa) 56.7
Isoelectric Point (pI) 6.98

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
1M7S OXIDOREDUCTASE 07/22/02 Crystal Structure Analysis of Catalase CatF of Pseudomonas syringae Pseudomonas syringae 1.8 X-RAY DIFFRACTION 95.9

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 319 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001474 (1465 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_3582
Search term: katB
Search term: catalase

Human Homologs

Ensembl 110, assembly GRCh38.p14
catalase [Source:HGNC Symbol;Acc:HGNC:1516]
E-value: 4.9e-103
Percent Identity: 42.8

References

No references are associated with this feature.