Pseudomonas syringae pv. tomato DC3000, PSPTO_3671

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3671
NCBI Old Locus Tag	PSPTO3671
Name	Synonym: PSPTO3671
Replicon	chromosome
Genomic location	4139347 - 4140132 (+ strand)

Cross-References

RefSeq	NP_793445.1
GI	28870826
Entrez	1185336
INSDC	AAO57140.1
NCBI Locus Tag	PSPTO_3671
NCBI Old Locus Tag	PSPTO3671
UniParc	UPI000000902E
UniProtKB Acc	Q87YX1
UniProtKB ID	Q87YX1_PSESM
UniRef100	UniRef100_Q87YX1
UniRef50	UniRef50_S3MEG3
UniRef90	UniRef90_S3MEG3

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-10.29
Kyte-Doolittle Hydrophobicity Value	-0.375
Molecular Weight (kDa)	29.7
Isoelectric Point (pI)	4.46

Subcellular localization

Individual Mappings	Localization Confidence PMID Outer Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 38 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000163 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3671

Human Homologs

References