Pseudomonas syringae pv. tomato DC3000, PSPTO_3774

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3774
NCBI Old Locus Tag	PSPTO3774
Name	Synonym: PSPTO3774
Replicon	chromosome
Genomic location	4275912 - 4276496 (+ strand)

Cross-References

RefSeq	NP_793548.1
GI	28870929
Entrez	1185442
INSDC	AAO57243.1
NCBI Locus Tag	PSPTO_3774
NCBI Old Locus Tag	PSPTO3774
UniParc	UPI0000009092
UniProtKB Acc	Q87YM1
UniProtKB ID	Q87YM1_PSESM
UniRef100	UniRef100_Q87YM1
UniRef50	UniRef50_Q87YM1
UniRef90	UniRef90_Q87YM1

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-7.30
Kyte-Doolittle Hydrophobicity Value	-0.241
Molecular Weight (kDa)	20.8
Isoelectric Point (pI)	5.16

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 35 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG017275 (3 members)
Putative Inparalogs	1 predicted inparalogs hypothetical protein (PSPTO_0479) 51.0% identity

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3774

Human Homologs

References