Pseudomonas syringae pv. tomato DC3000, PSPTO_4019

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_4019
NCBI Old Locus TagPSPTO4019
Name
Synonym: PSPTO4019
Replicon chromosome
Genomic location 4530408 - 4531739 (+ strand)

Cross-References

RefSeq NP_793781.1
GI 28871162
Entrez 1185698
INSDC AAO57476.1
NCBI Locus Tag PSPTO_4019
NCBI Old Locus Tag PSPTO4019
UniParc UPI0000009171
UniProtKB Acc Q87Y01
UniProtKB ID RIMO_PSESM
UniRef100 UniRef100_Q87Y01
UniRef50 UniRef50_A8AIT5
UniRef90 UniRef90_Q87Y01

Product

Feature Type CDS
Coding Frame 1
Product Name
ribosomal protein S12 methylthiotransferase
Synonyms
Evidence for Translation
Charge (pH 7) -14.15
Kyte-Doolittle Hydrophobicity Value -0.075
Molecular Weight (kDa) 49.3
Isoelectric Point (pI) 4.89

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 640 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000882 (554 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_4019

Human Homologs

References

No references are associated with this feature.