Pseudomonas syringae pv. tomato DC3000, PSPTO_4025

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_4025
NCBI Old Locus TagPSPTO4025
Name
Synonym: PSPTO4025
Replicon chromosome
Genomic location 4535318 - 4536244 (+ strand)

Cross-References

RefSeq NP_793787.1
GI 28871168
Entrez 1185704
INSDC AAO57482.1
NCBI Locus Tag PSPTO_4025
NCBI Old Locus Tag PSPTO4025
UniParc UPI0000009177
UniProtKB Acc Q87XZ5
UniProtKB ID Q87XZ5_PSESM
UniRef100 UniRef100_A0A038GJ07
UniRef50 UniRef50_C1DSP6
UniRef90 UniRef90_Q4KHB2

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 0.26
Kyte-Doolittle Hydrophobicity Value -0.140
Molecular Weight (kDa) 34.5
Isoelectric Point (pI) 7.06

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 542 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002230 (553 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_4025

Human Homologs

References

No references are associated with this feature.