Pseudomonas syringae pv. tomato DC3000, PSPTO_4029

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_4029
NCBI Old Locus TagPSPTO4029
Name
Synonym: PSPTO4029
Replicon chromosome
Genomic location 4537594 - 4538304 (- strand)

Cross-References

RefSeq NP_793791.1
GI 28871172
Entrez 1185708
INSDC AAO57486.1
NCBI Locus Tag PSPTO_4029
NCBI Old Locus Tag PSPTO4029
UniParc UPI000000917B
UniProtKB Acc Q87XZ1
UniProtKB ID Q87XZ1_PSESM
UniRef100 UniRef100_Q87XZ1
UniRef50 UniRef50_I7B6K9
UniRef90 UniRef90_Q87XZ1

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 1.98
Kyte-Doolittle Hydrophobicity Value -0.202
Molecular Weight (kDa) 26.9
Isoelectric Point (pI) 7.76

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 82 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002068 (552 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_4029

Human Homologs

References

No references are associated with this feature.