Pseudomonas syringae pv. tomato DC3000, PSPTO_4102

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_4102
NCBI Old Locus TagPSPTO4102
Name
Synonym: PSPTO4102
Replicon chromosome
Genomic location 4623165 - 4623362 (+ strand)

Cross-References

RefSeq NP_793863.1
GI 28871244
Entrez 1185782
INSDC AAO57558.1
NCBI Locus Tag PSPTO_4102
NCBI Old Locus Tag PSPTO4102
UniParc UPI00000091BE
UniProtKB Acc Q87XS4
UniProtKB ID Q87XS4_PSESM
UniRef100 UniRef100_Q87XS4
UniRef50 UniRef50_Q87XS4
UniRef90 UniRef90_Q87XS4

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 0.64
Kyte-Doolittle Hydrophobicity Value 0.620
Molecular Weight (kDa) 7.2
Isoelectric Point (pI) 7.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Pathogenic
Found only in pathogenic strains
Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG018572 (1 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_4102

Human Homologs

References

No references are associated with this feature.