Pseudomonas syringae pv. tomato DC3000, PSPTO_4105

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4105
NCBI Old Locus Tag	PSPTO4105
Name	Synonym: PSPTO4105
Replicon	chromosome
Genomic location	4626944 - 4628383 (- strand)

Cross-References

RefSeq	NP_793866.1
GI	28871247
Entrez	1185785
INSDC	AAO57561.1
NCBI Locus Tag	PSPTO_4105
NCBI Old Locus Tag	PSPTO4105
UniParc	UPI00000091C1
UniProtKB Acc	Q87XS1
UniProtKB ID	Q87XS1_PSESM
UniRef100	UniRef100_Q87XS1
UniRef50	UniRef50_I4MZT5
UniRef90	UniRef90_Q87XS1

Product

Feature Type	CDS
Coding Frame	1
Product Name	major facilitator family transporter
Synonyms
Evidence for Translation
Charge (pH 7)	16.79
Kyte-Doolittle Hydrophobicity Value	0.606
Molecular Weight (kDa)	52.1
Isoelectric Point (pI)	10.29

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 371 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000234 (2404 members)
Putative Inparalogs	1 predicted inparalogs major facilitator family transporter (PSPTO_B0010) 96.5% identity

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4105 Search term: major facilitator family transporter

Human Homologs

References