Pseudomonas syringae pv. tomato DC3000, PSPTO_4107

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_4107
NCBI Old Locus TagPSPTO4107
Name
Synonym: PSPTO4107
Replicon chromosome
Genomic location 4631003 - 4631317 (- strand)

Cross-References

RefSeq NP_793868.1
GI 28871249
Entrez 1185787
INSDC AAO57563.1
NCBI Locus Tag PSPTO_4107
NCBI Old Locus Tag PSPTO4107
UniParc UPI00000091C3
UniProtKB Acc Q87XR9
UniProtKB ID Q87XR9_PSESM
UniRef100 UniRef100_Q87XR9
UniRef50 UniRef50_Q87XR9
UniRef90 UniRef90_Q87XR9

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -7.01
Kyte-Doolittle Hydrophobicity Value 0.220
Molecular Weight (kDa) 11.4
Isoelectric Point (pI) 4.07

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 34 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001037 (528 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_4107

Human Homologs

References

No references are associated with this feature.