Pseudomonas syringae pv. tomato DC3000, PSPTO_4108

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_4108
NCBI Old Locus TagPSPTO4108
Name
Synonym: PSPTO4108
Replicon chromosome
Genomic location 4631636 - 4632760 (+ strand)

Cross-References

RefSeq NP_793869.1
GI 28871250
Entrez 1185788
INSDC AAO57564.1
NCBI Locus Tag PSPTO_4108
NCBI Old Locus Tag PSPTO4108
UniParc UPI00000091C4
UniProtKB Acc Q87XR8
UniProtKB ID Q87XR8_PSESM
UniRef100 UniRef100_Q87XR8
UniRef50 UniRef50_P21175
UniRef90 UniRef90_S3N136

Product

Feature Type CDS
Coding Frame 1
Product Name
leucine ABC transporter subunit substrate-binding protein LivK
Synonyms
Evidence for Translation
Charge (pH 7) -0.62
Kyte-Doolittle Hydrophobicity Value -0.182
Molecular Weight (kDa) 39.5
Isoelectric Point (pI) 6.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 419 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001036 (553 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_4108

Human Homologs

References

No references are associated with this feature.