Pseudomonas syringae pv. tomato DC3000, PSPTO_4113

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_4113
NCBI Old Locus TagPSPTO4113
Name
Synonym: PSPTO4113
Replicon chromosome
Genomic location 4636922 - 4637602 (+ strand)

Cross-References

RefSeq NP_793874.1
GI 28871255
Entrez 1185793
INSDC AAO57569.1
NCBI Locus Tag PSPTO_4113
NCBI Old Locus Tag PSPTO4113
UniParc UPI00000091C9
UniProtKB Acc Q87XR3
UniProtKB ID Q87XR3_PSESM
UniRef100 UniRef100_Q87XR3
UniRef50 UniRef50_Q88NS0
UniRef90 UniRef90_Q87XR3

Product

Feature Type CDS
Coding Frame 1
Product Name
lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) 1.56
Kyte-Doolittle Hydrophobicity Value -0.370
Molecular Weight (kDa) 24.6
Isoelectric Point (pI) 7.86

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 4 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001026 (432 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_4113
Search term: lipoprotein

Human Homologs

References

No references are associated with this feature.